Dear Professor David:
I want to use the final configuration of GCMC adsorption as the initial configuration for MD simulation to calculate MSD. So I renamed the Restart file obtained by adsorption to RestartInitial and used the following file as input. After the simulation is completed, I did not get the corresponding MSDOrderN. Why is this? Is my input file setting correct?
SimulationType MolecularDynamics
NumberOfCycles 1000000
NumberOfInitializationCycles 0
NumberOfEquilibrationCycles 1000000
PrintEvery 5000
PrintPropertiesEvery 1000
RestartFile yes
Ensemble NVT
TimeStep 0.0005
ComputeMSD yes
PrintMSDEvery 5000
Forcefield UFF-Direding
UseChargesFromCIFFile yes
ChargeMethod Ewald
Framework 0
FrameworkName COF2207-8
CutOffVDW 12.8
UnitCells 1 1 1
ExternalTemperature 298
ExternalPressure 1e5
Component 0 MoleculeName CO2
MoleculeDefinition TraPPE
TranslationProbability 0.5
RotationProbability 0.5
ReinsertionProbability 0.5
SwapProbability 1.0
CreateNumberOfMolecules 0
I want to use the final configuration of GCMC adsorption as the initial configuration for MD simulation to calculate MSD. So I renamed the Restart file obtained by adsorption to RestartInitial and used the following file as input. After the simulation is completed, I did not get the corresponding MSDOrderN. Why is this? Is my input file setting correct?
SimulationType MolecularDynamics
NumberOfCycles 1000000
NumberOfInitializationCycles 0
NumberOfEquilibrationCycles 1000000
PrintEvery 5000
PrintPropertiesEvery 1000
RestartFile yes
Ensemble NVT
TimeStep 0.0005
ComputeMSD yes
PrintMSDEvery 5000
Forcefield UFF-Direding
UseChargesFromCIFFile yes
ChargeMethod Ewald
Framework 0
FrameworkName COF2207-8
CutOffVDW 12.8
UnitCells 1 1 1
ExternalTemperature 298
ExternalPressure 1e5
Component 0 MoleculeName CO2
MoleculeDefinition TraPPE
TranslationProbability 0.5
RotationProbability 0.5
ReinsertionProbability 0.5
SwapProbability 1.0
CreateNumberOfMolecules 0